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Dot- and slot-blot hybridization apply extracted DNA from a sample directly onto a specific area (dot or slot) of filter paper, with the gel electrophoresis and transfer steps of Southern hybridization being bypassed.

Dot blot technique is a method of identifying DNA, RNA and Protein in the sample. It is the simplified form of Southern, Northern and Western blotting for DNA, RNA, and protein isolation, respectively. This method can detect the presence or absence of biomolecule in a single run.

DNA dot/slot blotting is a simple technique that allows hybridization and analysis of unfractionated DNA. The protocol described here is adapted from UNIT 2.9B (Brown, 1999) . 3.

R loops (DNA-RNA hybrid) are three-stranded nucleic acid structures that comprise of template DNA strand hybridized with the nascent RNA leaving the displaced non-template strand. Although a programmed R loop formation can serve as powerful regulators of gene...

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Slot blotting is a molecular biology technique used to detect and quantify specific DNA, RNA, or protein molecules in a biological sample. It is a variation of the more commonly known technique called Southern blotting (used for DNA), Northern blotting (used for RNA), and Western blotting (used for proteins).

Introduction. This protocol provides a step-by-step guide to a dot-blot assay that allows a quick comparative assessment of the abundance of R-loop, a three-stranded nucleic acid structure. R-loop forms when RNA invades a double-stranded DNA to generate an RNA-DNA hybrid and displaces the other DNA strand.

Slot Blot Assay for Detection of R Loops. Altaf H. Sarker and Priscilla K. Cooper. Abstract. R loops (DNA-RNA hybrid) are three-stranded nucleic acid structures that comprise of template DNA strand hybridized with the nascent RNA leaving the displaced non-template strand.

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Quantification of DNA by Slot-Blot Analysis 35 16. 5' Biotinylated oligonucleotide probe: Dilute to 15 pmol/ μL and store at -20 °C in aliquots. Once an aliquot is opened, store at 4°C and discard after 2 wk. The oligonucleotide can be ordered from Oswel, sequence (5'-3'): TAG AAG CAT TCT CAG AAA CTA CTT TGT GAT GAT TGC ATT C.





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